Publications of the HPC²

Publications by HPC centers and institutes include items from past years such as an early publication written by one of the HPC founding investigators, Dr. Joe Thompson. Numerical Grid Generation was originally published by Elsevier Science Publishing Co., Inc. in 1985, and the copyright was transferred to Joe F. Thompson in 1997.

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Publications for: Zhang
Book Chapter
Zhang, L., Laramee, R. S., Thompson, D., Sescu, A., & Chen, G. (2015). Extracting and Visualizing Discontinuity Among Neighboring Integral Curves of 2D Vector Fields. Topology-Based Methods in Visualization.

Peer-Reviewed Journals

Liang, R., Wang, Z., Zhang, S., Feng, Y., Jiang, L., Ma, X., Chen, W., & Tate, D. (2015). Visual Exploration of HARDI Fibers with Probabilistic Tracking. Information Sciences. 330, 483-494. DOI:10.1016/j.ins.2015.04.045.

Lee, C. H., Zhang, W., Liao, J., Carruthers, C. A., Sacks, J. I., & Sacks, M. S. (2015). On the Presence of Affine Fibril and Fiber Kinematics in the Mitral Valve Anterior Leaflet. Biophysical journal. 108(8), 2074-2087. DOI:10.1016/j.bpj.2015.03.019. [Abstract] [Document Site]

Chen, H., Zhang, S., Chen, W., Mei, H., Zhang, J., Mercer, A., Liang, R., & Qu, H. (2015). Uncertainty-aware Multidimensional Ensemble Data Visualization and Exploration. IEEE Transactions on Visualization and Computer Graphics. 21(9), 1072-1086.

Shao, Y., Gan, Z., Epifanovsky, E., Gilbert, A. T. B., Wormit, M., Kussmann, J., Lange, A. W., Behn, A., Deng, J., Feng, X., Ghosh, D., Goldey, M., Horn, P. R., Jacobson, L. D., Kaliman, I., Khaliullin, R. Z., Ku&#347;, T., Landau, A., Liu, J., Proynov, E. I., Rhee, Y. M., Richard, R. M., Rohrdanz, M. A., Steele, R. P., Sundstrom, E. J., III, H. L. W., Zimmerman, P. M., Zuev, D., Albrecht, B., Alguire, E., Austin, B., Beran, G. J. O., Bernard, Y. A., Berquist, E., Brandhorst, K., Bravaya, K. B., Brown, S. T., Casanova, D., Chan, C. M., Chen, Y., Chien, S. H., Closser, K. D., Crittenden, D. L., Diedenhofen, M., , R. A. D. J., Do, H., Dutoi, A. D., Edgar, R. G., Fatehi, S., Fusti-Molnar, L., Ghysels, A., Golubeva-Zadorozhnaya, A., Gomes, J., Hanson-Heine, M. W. D., Harbach, P. H. P., Hauser, A. W., Hohenstein, E. G., Holden, Z. C., Jagau, T. C., Ji, H., Kaduk, B., Khistyaev, K., Kim, J., Kim, J., King, R. A., Klunzinger, P., Kosenkov, D., Kowalczyk, T., Krauter, C. M., Lao, K. U., Laurent, A., Lawler, K. V., Levchenko, S. V., Lin, C. Y., Liu, F., Livshits, E., Lochan, R. C., Luenser, A., Manohar, P., Manzer, S. F., Mao, S. P., Mardirossian, N., Marenich, A. V., Maurer, S. A., Mayhall, N. J., Oana, C. M., Olivares-Amaya, R., O’Neill, D. P., Parkhill, J. A., Perrine, T. M., Peverati, R., Prociuk, A., Rehn, D. R., Rosta, E., Sharada, S. M., Sharma, S., Small, D. W., Sodt, A., Stein, T., Stück, D., Su, Y. C., Thom, A. J. W., Tsuchimochi, T., Vanovschi, V., Vogt, L., Vydrov, O., Watson, M. A., Wenzel, J., White, A., Williams, C. F., Yeganeh, S., Yost, S. R., You, Z. Q., Zhang, I. Y., Zhang, X., Zhao, Y., Brooks, B. R., Chan, G. K. L., Chipman, D. M., Cramer, C. J., III, W. A. G., Gordon, M. S., Hehre, W. J., Klamt, A., III, H. F. S., Schmidt, M. W., Sherrill, C. D., Truhlar, D. G., Warshel, A., Xu, X., Aspuru-Guzik, A., Baer, R., Bell, A. T., Besley, N. A., Chai, J. D., Dreuw, A., Dunietz, B. D., Furlani, T. R., Gwaltney, S. R., Hsu, C. P., Jung, Y., Kong, J., Lambrecht, D. S., Liang, W. Z., Ochsenfeld, C., Rassolov, V. A., Slipchenko, L. V., Subotnik, J. E., Voorhis, T. V., Herbert, J. M., Krylov, A. I., Gill, P. M. W., & Head-Gordon, M. (2015). Advances in Molecular Quantum Chemistry Contained in the Q-Chem 4 Program Package. Molecular Physics. 113(2), 184-215. DOI:10.1080/00268976.2014.952696.

Wang, Y. H., Fan, C. R., Zhang, J., Niu, T., Zhang, S., & Jiang, J. R. (2015). Forecast Verification and Visualization Based on Gaussian Mixture Model Co-estimation. Computer Graphics Forum. 34(6), 99-110.

Peer-Reviewed Conference Abstracts
Zhang, L., & Walters, K. B. (2015). Alcohol Stabilization of Bio-Oils during High Temperature Treatment. 2015 AIChE Annual Meeting. Salt Lake City, UT.

Peer-Reviewed Conference Papers
Zhang, F., Zhang, S., Wong, P., Swan II, J. E., & Jankun-Kelly, T. J. (2015). A Visual and Statistical Benchmark for Graph Sampling Methods. Exploring Graphs at Scale (EGAS) Workshop, IEEE VIS 2015. Chicago, IL, USA.

Zhang, L., Laramee, R., Thompson, D., Sescu, A., & Chen, G. (2015). Vector Fields Segmentation Based on Integral Curve Attributes. Proceedings China Vis 2015, Jul 17-18. Tianjin, China.

Patnaik, S.S, Zhang, S., & Liao, J. (2015). 3D Orientation of Smooth Muscle Fibers in Sheep Vaginal Tract: A Diffusion Tensor-MRI Study. The Simon Foundation's Innovating for Continence Conference. Indianapolis, IN.

Zhang, S., Pruett, W., & Hester, R. (2015). Visualization and Classification of Physiological Failure Modes in Ensemble Hemorrhage Simulation. Conference on Visualization and Data Analysis. San Francisco, CA.

van der zwaag, J., Zhang, S., Moorhead, R. J.,, Welch, D., & Dyer, J. (2015). Visualizing Uncertainty of River Model Ensembles. Conference on Visualization and Data Analysis 2015. San Francisco, CA: IS&T/SPIE. [Abstract]

Peer-Reviewed Conference Posters
Anreddy, S., Zhang, S., Mercer, A., Dyer, J., & Swan II, J. E. (2015). Visual Scalability of Spatial Ensemble Uncertainty. Short Papers and Posters, Proceedings of IEEE VIS 2015. Chicago, Illinois, USA: IEEE.

Shi, X., Lee, D., Patnaik, S.S, Cooley, J., Prabhu, R., Rhee, H., Williams, L. N., Zhang, S., & Liao, J. (2015). Elastin Fiber Network in Porcine Epicardium: 3D Visualization and Quantification. Biomedical Engineering Society Annual Meeting. Tampa, FL.

Pawan, K. C., Shah, M., Liao, J., & Zhang, G. (2015). Developing Efficient Recellularization Strategies for Decellularized Porcine Myocardial Scaffold. Biomedical Engineering Society Annual Meeting. Tampa, FL.

Patnaik, S.S, Zhang, S., Dandolu, V., Christiansen, D., Ryan, P. L., & Liao, J. (2015). 3D Orientation of Smooth Muscle Fibers in Sheep Vaginal Tract: a Diffusion Tensor-MRI Study. Innovating for continence: the Engineering challenge, Simon Foundation Meeting. Chicago, IL.

Non-Refereed Conference Posters
Zhang, L., & Walters, K. B. (2015). Effect of Storage Temperature and Time on the Physical and Chemical Properties of Pyrolysis Oil. 13th Annual Graduate Student Research Symposium. Mississippi State University, MS.