Publications of the HPC²

Publications by HPC centers and institutes include items from past years such as an early publication written by one of the HPC founding investigators, Dr. Joe Thompson. Numerical Grid Generation was originally published by Elsevier Science Publishing Co., Inc. in 1985, and the copyright was transferred to Joe F. Thompson in 1997.

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Results Divided By Year
2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014

Publications for: Peterson
Peer-Reviewed Journals
Green, R. E., Braun, E. L., Armstrong, J., Earl, D., Nguyen, N., Hickey, G., Vandewege, M. W., StJohn, J. A., Capella-Gutierrez, S., Castoe, T. A., Kern, C., Fujita, M. K., Opazo, J. C., Jurka, J., Kojima, K. K., Caballero, J., Hubley, R. M., Smit, A. F., Platt, R. N., Lavoie, C. A., Ramakodi, M. P., , J. W. F. J., Suh, A., Isberg, S. R., Miles, L., Chong, A. Y., Jaratlerdsiri, W., Gongora, J., Moran, C., Iriarte, A., McCormack, J., Burgess, S. C., Edwards, S. V., Lyons, E., Williams, C., Breen, M., Howard, J. T., Gresham, C. R., Peterson, D. G., Schmitz, J., Pollock, D. D., Haussler, D., Triplett, E. W., Zhang, G., Irie, N., Jarvis, E. D., Brochu, C. A., Schmidt, C. J., McCarthy, F. M., Faircloth, B. C., Hoffman, F., Glenn, T. C., Gabaldon, T., Paten, B., & Ray, D. A. (2014). Three Crocodilian Genomes Reveal Ancestral Patterns of Evolution among Archosaurs. Science. 346(6215), 1254449. DOI:10.1126/science.1254449. [Document]

Jaratlerdsiri, W., Deakin, J., Godinez, R. M., Shan, X., Peterson, D. G., Marthey, S., Lyons, E., McCarthy, F. M., Isberg, S. R., Higgins, D. P., Chong, A. Y., John, J. S., Glenn, T. C., Ray, D. A., & Gongora, J. (2014). Comparative Genome Analyses Reveal Distinct Structure in the Saltwater Crocodile MHC. PLoS ONE. 9(12), e114631. DOI:10.1371/journal.pone.0114631. [Document]

Wang, X. Q., Showmaker, K. C., Yu, X. Q., Bi, T., Hsu, C. Y., Baird, S. M., Peterson, D. G., Li, X. D., & Lu, S. E. (2014). Draft genome sequence of Burkholderia pyrrocinia Lyc2, a biological control strain that can suppress multiple plant microbial pathogens. Genome Announcements. 2(5), pii: e00991-14. DOI:10.1128/genomeA.00991-14. [Document]

Magbanua, Z. V., Arick, M., II, Buza, T., Hsu, C. Y., Showmaker, K. C., Chouvarine, P., Deng, P., Peterson, D. G., & Lu, S. (2014). Transcriptomic Dissection of the Rice - Burkholderia glumae Interaction. BMC Genomics. 15, 755. DOI:10.1186/1471-2164-15-755. [Abstract]

Buza, T., Arick, M., II, Wang, H, & Peterson, D. G. (2014). Computational Prediction of Disease MicroRNAs in Domestic Animals. BMC Research Notes. 7, 403. DOI:10.1186/1756-0500-7-403. [Abstract] [Document Site]

Guo, H., Wang, X., Gundlach, H., Mayer, K. F., Peterson, D. G., Scheffler, B. E., Chee, P. W., & Paterson, A. H. (2014). Extensive and Biased Intergenomic Non-reciprocal DNA Exchanges Shaped a Nascent Polyploid Genome, Gossypium (Cotton). Genetics. 197(4), 1153-1163. DOI:10.1534/genetics.114.166124. [Abstract] [Document Site]

Non-Refereed Conference Abstracts
Buza, T., Arick, M., II, Wang, H, & Peterson, D. G. (2014). Human Disease MicroRNAs and their Counterparts in Domestic Animals. Mississippi-INBRE Annual Research Symposium. The University of Southern Mississippi, Hattiesburg, MS: MS-INBRE. [Abstract] [Document Site]

Non-Refereed Conference Posters
Sanders, W. S., Ganji, S., Arnold, J. P., Arick, M., II, Showmaker, K. C., Bartlett, B. D., Cooksey, A., Watts, J., Knudstrup, S., Magbanua, Z. V., Peterson, D. G., & Wubben, M. J. (2014). Assembly, Annotation, and Proteogenomic Mapping of Rotylenchulus reniformis. Plant and Animal Genome XXII. San Diego, CA. [Abstract] [Document] [Document Site]

Web Publications
Peterson, D. G., & Abbott, C. F. (2014). Institute for Genomics, Biocomputing and Biotechnology - 2014.